C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517543 PAICSP4-001 ENSG00000254244 9606 + 8:4787332-4788584 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleOvaryPlacentaTestisENST00000517543
Transcript ID Brain Heart Muscle Ovary Placenta Testis
ENST00000517543 0.893±0.00 0.041±0.00 0.016±0.00 0.034±0.00 0.017±0.00 0.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0002 CGP 8:2045040-4994972
CIL_0000LC CIL_0000LC_0001 CGP 8:2935353-6643623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117536 Paics-002 protein_coding Mus_musculus 0 1332
ENSMUST00000120912 Paics-001 protein_coding Mus_musculus 0 1332
ENSMUST00000031160 Paics-003 protein_coding Mus_musculus 0 1332
ENSMUST00000153648 Paics-005 nonsense_mediated_decay Mus_musculus 0 627
ENSMUST00000140051 Paics-006 retained_intron Mus_musculus 5e-32 143

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