C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518134 RP11-54C4.1-002 ENSG00000213433 9606 - 5:151765859-151766378 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000518134
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000518134 2.488±0.00 1.193±0.00 0.181±0.00 1.612±0.00 1.458±0.00 1.391±0.00 0.645±0.00 0.596±0.00 0.536±0.00 0.444±0.00 0.705±0.00 0.395±0.14 0.208±0.00 2.679±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IC CIL_0007IC_0002 CGP 5:151661096-151772532

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 394
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 388
ENSMUST00000172206 Gm17511-201 protein_coding Mus_musculus 0 348
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000117047 Gm12165-001 processed_pseudogene Mus_musculus 0 250

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