C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin protein ligase E3 component n-recognin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518205 UBR5-004 ENSG00000104517 9606 - 8:102254198-102272931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000518205
Transcript ID Ovary Placenta Testis
ENST00000518205 24.751±0.00 5.235±0.00 24.017±7.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000S CIL_00000S_0001 CGP 8:102204502-102412841
CIL_00000U CIL_00000U_0001 CGP 8:102253012-102561017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110336 Ubr5-201 protein_coding Mus_musculus 0 2420

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