C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syndecan 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518385 SDC2-002 ENSG00000169439 9606 + 8:96493813-96610174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000518385
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000518385 10.116±0.00 5.058±0.00 4.071±0.00 15.792±0.00 16.672±0.00 5.145±0.00 9.937±0.00 15.830±0.00 8.836±6.51 3.617±0.00 6.496±2.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SV CIL_0006SV_0001 CGP 8:96493351-97149654

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008092 IEA cytoskeletal protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022871 Sdc2-001 protein_coding Mus_musculus 0 994
ENSMUST00000147013 Sdc2-002 processed_transcript Mus_musculus 4e-19 100

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