C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519295 AP3B1-002 ENSG00000132842 9606 - 5:78002326-78294692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000519295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000519295 10.931±0.00 5.054±0.00 3.995±0.00 3.342±0.77 5.141±1.90 6.256±1.66 3.134±1.62 6.777±4.00 2.401±0.34 2.910±0.35 1.591±1.15 5.078±1.70 10.379±3.73 6.250±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DK CIL_0008DK_0001 VISTA 5:77424780-78026683
CIL_00091B CIL_00091B_0001 VISTA 5:77543897-78144918
CIL_0007SL CIL_0007SL_0001 VISTA 5:77545919-78149307
CIL_00091C CIL_00091C_0001 VISTA 5:77551756-78152775
CIL_00091D CIL_00091D_0001 VISTA 5:77671560-78273382
CIL_0007OX CIL_0007OX_0002 UCNEbase 5:77741346-78218792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005765 IDA lysosomal membrane
GO:0005794 IEA Golgi apparatus
GO:0006886 TAS:IEA intracellular protein transport
GO:0008089 ISS anterograde axon cargo transport
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0019903 IPI protein phosphatase binding
GO:0030117 IEA membrane coat
GO:0030123 IEA AP-3 adaptor complex
GO:0030742 IPI GTP-dependent protein binding
GO:0031410 IEA cytoplasmic vesicle
GO:0032438 IMP melanosome organization
GO:0048490 ISS anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022196 Ap3b1-201 protein_coding Mus_musculus 0 2442

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