C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromatin accessibility complex 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519533 CHRAC1-002 ENSG00000104472 9606 + 8:140511311-140516467 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000519533
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000519533 6.236±0.00 4.897±0.00 3.524±0.00 3.442±0.00 4.288±0.00 3.157±2.17 1.229±0.00 2.315±0.00 3.215±2.26 1.812±0.00 8.339±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Y5 CIL_0002Y5_0001 CGP 8:139730343-140517137
CIL_0002XO CIL_0002XO_0001 CGP 8:140511298-140635619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137698 Chrac1-002 retained_intron Mus_musculus 8e-21 106
ENSMUST00000089765 Chrac1-001 protein_coding Mus_musculus 8e-21 106

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