C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002XO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104472-ENSG00000123908 CGP 9606 8:140511298-140635619
GeneTranscriptPositionBiotype
ENSG00000104472 (CHRAC1)
chromatin accessibility complex 1 		ENST00000220913 (CHRAC1-001) 140511298-140517137 protein_coding
ENST00000518971 (CHRAC1-003) 140511918-140515185 protein_coding
ENST00000519533 (CHRAC1-002) 140511311-140516467 protein_coding
ENST00000519618 (CHRAC1-004) 140511982-140515765 protein_coding
ENST00000523569 (CHRAC1-005) 140514294-140515541 retained_intron
ENSG00000123908 (AGO2)
argonaute RISC catalytic component 2 		ENST00000220592 (AGO2-001) 140531165-140635619 protein_coding
ENST00000517293 (AGO2-005) 140572558-140635546 processed_transcript
ENST00000518019 (AGO2-004) 140626485-140635546 processed_transcript
ENST00000519347 (AGO2-009) 140535391-140539449 retained_intron
ENST00000519980 (AGO2-002) 140531421-140635546 protein_coding
ENST00000520412 (AGO2-008) 140532533-140541457 retained_intron
ENST00000520628 (AGO2-010) 140532094-140532706 processed_transcript
ENST00000521325 (AGO2-007) 140555408-140556238 retained_intron
ENST00000523609 (AGO2-003) 140531421-140635546 nonsense_mediated_decay
ENST00000524328 (AGO2-006) 140572902-140605888 protein_coding
ENSG00000259758 (CASC7)
cancer susceptibility candidate 7 (non-protein coding) 		ENST00000560295 (CASC7-001) 140520156-140529501 lincRNA
ENSG00000280326 (RP11-642A1.1)
 ENST00000624905 (RP11-642A1.1-001) 140591684-140593201 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0002XO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068391-ENSMUSG00000036698 CGP 10090 15:73090392-73184840
GeneTranscriptPositionBiotype
ENSMUSG00000036698 (Ago2)
argonaute RISC catalytic subunit 2 		ENSMUST00000044113 (Ago2-001) 73095844-73184840 protein_coding
ENSMUSG00000068391 (Chrac1)
chromatin accessibility complex 1 		ENSMUST00000089765 (Chrac1-001) 73090392-73094075 protein_coding
ENSMUST00000134353 (Chrac1-003) 73090392-73097554 protein_coding
ENSMUST00000137698 (Chrac1-002) 73090412-73094774 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XO_0001ENSG00000104472ENST00000220913ENST00000518971ENST00000519533ENST00000519618ENST00000523569ENSG00000123908ENST00000220592ENST00000517293ENST00000518019ENST00000519347ENST00000519980ENST00000520412ENST00000520628ENST00000521325ENST00000523609ENST00000524328ENSG00000259758ENST00000560295ENSG00000280326ENST00000624905CIL_0002XO_0002ENSMUSG00000036698ENSMUST00000044113ENSMUSG00000068391ENSMUST00000089765ENSMUST00000134353ENSMUST00000137698
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XO_0001ENSG00000104472ENST00000220913ENST00000519533ENST00000519618ENST00000523569ENSG00000123908ENST00000220592ENST00000517293ENST00000519980ENST00000520412ENST00000523609ENSG00000259758ENST00000560295ENSG00000280326ENST00000624905CIL_0002XO_0002ENSMUSG00000036698ENSMUST00000044113ENSMUSG00000068391ENSMUST00000089765
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104472 ENST00000220913 4.100±0.00 4.395±0.00 1.060±0.00 1.352±0.00 2.376±0.23 2.257±0.14 3.083±1.67 2.788±0.44 1.975±0.38 3.304±0.76 3.484±2.87 5.827±1.50 5.884±2.34 5.040±2.16
ENST00000518971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519533 6.236±0.00 4.897±0.00 N/A N/A 3.524±0.00 3.442±0.00 4.288±0.00 3.157±2.17 1.229±0.00 2.315±0.00 3.215±2.26 1.812±0.00 N/A 8.339±0.00
ENST00000519618 N/A N/A 1.619±0.00 1.133±0.00 3.281±0.00 1.146±0.00 0.907±0.00 N/A 2.702±0.00 2.564±0.00 N/A 6.806±2.21 N/A N/A
ENST00000523569 5.995±0.00 4.796±0.00 0.847±0.00 1.968±0.00 N/A N/A N/A N/A 1.379±0.00 N/A 1.509±0.00 N/A N/A N/A
ENSG00000123908 ENST00000220592 N/A N/A 1.756±0.00 1.108±0.00 4.967±0.00 N/A 1.678±0.00 0.689±0.14 3.574±0.00 2.501±0.00 6.202±0.00 3.182±1.95 0.818±0.39 0.789±0.00
ENST00000517293 N/A N/A 5.152±0.00 N/A 16.568±0.00 N/A 8.252±0.00 5.174±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519980 N/A N/A 0.541±0.00 1.778±0.00 1.900±0.00 4.528±0.00 N/A N/A 0.225±0.00 N/A 4.754±1.13 0.664±0.00 0.479±0.00 0.596±0.01
ENST00000520412 N/A N/A N/A N/A N/A 3.461±0.00 N/A 1.716±0.00 1.138±0.00 N/A N/A N/A N/A N/A
ENST00000520628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523609 N/A 2.228±0.00 0.512±0.00 1.259±0.00 1.217±0.00 0.769±0.00 1.329±0.00 0.524±0.05 0.709±0.00 6.584±0.00 8.058±0.00 2.746±2.05 1.219±0.14 1.048±0.18
ENST00000524328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259758 ENST00000560295 2.625±0.00 2.842±0.00 1.536±0.00 2.189±1.69 3.154±0.37 4.217±0.00 1.822±1.07 1.836±0.85 1.125±0.00 5.362±0.00 3.720±2.22 4.807±2.44 2.196±0.82 1.808±0.63
ENSG00000280326 ENST00000624905 N/A N/A 0.035±0.00 0.154±0.00 N/A N/A 0.051±0.04 0.167±0.00 0.117±0.11 N/A 0.082±0.07 0.391±0.36 N/A 0.156±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036698 ENSMUST00000044113 8.393±2.99 9.364±0.93 4.870±2.21 6.775±2.52 7.301±4.53 10.983±3.14 5.623±0.14 7.320±0.36 6.387±3.66 9.459±1.47 6.544±0.39 7.968±3.37 7.686±3.75 3.581±0.07
ENSMUSG00000068391 ENSMUST00000089765 26.131±0.59 33.996±1.78 32.016±4.51 16.738±4.89 32.012±7.54 22.610±2.90 32.017±3.68 32.955±1.69 26.652±7.78 26.222±0.92 36.902±2.61 35.165±4.55 23.319±5.22 207.562±49.31
ENSMUST00000134353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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