C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 49, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519540 FAM49B-004 ENSG00000153310 9606 - 8:129841497-129939872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000519540
Transcript ID Adipose Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000519540 2.411±0.00 3.957±1.67 2.243±0.00 2.449±0.00 0.777±0.00 1.241±0.00 1.504±0.00 9.158±6.93 7.017±0.84 9.491±3.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0001 VISTA 8:129331844-129935071
CIL_0007U4 CIL_0007U4_0001 VISTA 8:129332688-129934097
CIL_0004ZN CIL_0004ZN_0001 CGP 8:129748196-130017129
CIL_0004ZM CIL_0004ZM_0001 CGP 8:129839593-130443660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164532 Fam49b-202 protein_coding Mus_musculus 0 2399
ENSMUST00000063838 Fam49b-201 protein_coding Mus_musculus 0 2398
ENSDART00000102484 fam49bb-202 protein_coding Danio_rerio 0 584
ENSDART00000066784 fam49bb-201 protein_coding Danio_rerio 0 582
ENSDART00000132282 fam49bb-001 protein_coding Danio_rerio 0 551

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