C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 49, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519824 FAM49B-001 ENSG00000153310 9606 - 8:129839593-129939832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000519824
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000519824 1.772±0.00 13.114±8.12 2.487±0.00 0.604±0.00 1.669±0.00 0.763±0.37 1.116±0.00 4.068±2.89 2.082±0.00 1.980±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D6 CIL_0008D6_0001 VISTA 8:129331844-129935071
CIL_0007U4 CIL_0007U4_0001 VISTA 8:129332688-129934097
CIL_0004ZN CIL_0004ZN_0001 CGP 8:129748196-130017129
CIL_0004ZM CIL_0004ZM_0001 CGP 8:129839593-130443660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005929 IEA cilium
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063838 Fam49b-201 protein_coding Mus_musculus 0 2521
ENSMUST00000164532 Fam49b-202 protein_coding Mus_musculus 0 2435
ENSDART00000102484 fam49bb-202 protein_coding Danio_rerio 0 584
ENSDART00000066784 fam49bb-201 protein_coding Danio_rerio 0 582
ENSDART00000132282 fam49bb-001 protein_coding Danio_rerio 0 551

Loading