C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thyroglobulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520197 TG-011 ENSG00000042832 9606 + 8:132969458-133003256 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartENST00000520197
Transcript ID Adipose Heart
ENST00000520197 0.318±0.00 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PY CIL_0004PY_0001 CGP 8:132775358-133134903
CIL_0009D4 CIL_0009D4_0001 VISTA 8:132792656-133394938
CIL_0004PV CIL_0004PV_0001 CGP 8:132866958-133134903

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 7e-23 111
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 7e-23 111
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 3e-21 106
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 2e-19 100
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 2e-18 97
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 3e-17 94

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