C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21, pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119897 Rpl21-ps9-001 ENSMUSG00000084017 10090 + 2:156386741-156387222 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverPlacentaTestisENSMUST00000119897
Transcript ID Brain Breast Heart Liver Placenta Testis
ENSMUST00000119897 0.130±0.04 0.542±0.42 0.159±0.05 0.022±0.00 0.021±0.01 0.102±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056R CIL_00056R_0002 CGP 2:156312299-156543214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 250
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 555
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 555
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 555
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 555
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 453
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 547
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 475
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 547
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 514
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 418
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 411
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.000002 57
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 267
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 307
ENST00000436649 RP11-402L1.12-001 processed_pseudogene Homo_sapiens 0 353
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 329
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 0 305
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 497
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 418
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 514
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 246
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 329
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 462
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 248
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 492
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 462
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 545
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 392
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 0 305
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 449
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 497
ENST00000519294 TG-012 processed_transcript Homo_sapiens 2e-18 97
ENST00000520197 TG-011 processed_transcript Homo_sapiens 2e-18 97
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 490

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