C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520788 TRPA1-004 ENSG00000104321 9606 - 8:72053389-72055539 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENST00000520788
Transcript ID Heart Kidney Liver Muscle
ENST00000520788 1.596±0.00 2.472±0.00 0.265±0.00 0.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FQ CIL_0003FQ_0001 CGP 8:71841549-72075617
CIL_0005BY CIL_0005BY_0002 CGP 8:72019917-72938349

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041447 Trpa1-001 protein_coding Mus_musculus 0 267

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