C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520812 RP11-114M5.3-001 ENSG00000254103 9606 + 8:58503588-58504068 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000520812
Transcript ID Liver
ENST00000520812 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CM CIL_0008CM_0001 VISTA 8:57955651-58557562
CIL_0001T7 CIL_0001T7_0001 CGP 8:58490178-58582860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 496
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 494
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 492
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 483
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 451
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 444
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 250
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 230
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 8.00001e-41 171
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 5e-38 161
ENSMUST00000188671 RP23-325F17.2-001 processed_pseudogene Mus_musculus 5e-33 145
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 3e-30 135

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