C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520868 PABPC1-006 ENSG00000070756 9606 - 8:100702916-100706931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000520868
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000520868 76.471±0.00 22.026±0.00 75.810±0.00 162.247±0.00 27.541±0.00 48.755±0.00 45.025±0.00 141.260±0.00 40.931±0.00 175.133±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001809 Pabpc1-001 protein_coding Mus_musculus 0 1362
ENSMUST00000155116 Pabpc1-007 protein_coding Mus_musculus 0 739
ENSMUST00000146577 Pabpc1-003 processed_transcript Mus_musculus 0 726
ENSMUST00000162696 Gm16580-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000147116 Pabpc1-004 processed_transcript Mus_musculus 0 470
ENSMUST00000142357 Pabpc1-005 processed_transcript Mus_musculus 0 366

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