C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, nicotinic, alpha 2 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520933 CHRNA2-001 ENSG00000120903 9606 - 8:27459778-27471212 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004889 IDA acetylcholine-activated cation-selective channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 TAS plasma membrane
GO:0005892 IDA acetylcholine-gated channel complex
GO:0006810 IEA transport
GO:0006811 NAS:IEA ion transport
GO:0006812 IDA cation transport
GO:0007165 IDA signal transduction
GO:0007268 TAS synaptic transmission
GO:0015464 IDA acetylcholine receptor activity
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022620 Chrna2-001 protein_coding Mus_musculus 0 1528
ENSMUST00000067120 Chrna4-001 protein_coding Mus_musculus 0 880
ENSMUST00000108851 Chrna4-002 protein_coding Mus_musculus 0 880
ENSDART00000033947 chrna2a-001 protein_coding Danio_rerio 0 752
ENSDART00000079613 chrna2b-201 protein_coding Danio_rerio 0 726
ENSDART00000136317 chrna2b-001 protein_coding Danio_rerio 0 726
ENSMUST00000033882 Chrna6-201 protein_coding Mus_musculus 0 294
ENSMUST00000029562 Chrnb2-201 protein_coding Mus_musculus 0 226
ENSMUST00000135766 Chrna4-004 nonsense_mediated_decay Mus_musculus 0 196

Loading