C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3 component n-recognin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521922 UBR5-003 ENSG00000104517 9606 - 8:102254198-102412759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000521922
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000521922 1.892±0.00 2.008±0.27 4.452±0.00 4.452±0.00 1.952±0.28 1.813±0.61 6.956±0.00 3.804±0.00 2.024±0.00 2.715±2.29 18.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000S CIL_00000S_0001 CGP 8:102204502-102412841
CIL_00000U CIL_00000U_0001 CGP 8:102253012-102561017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0043130 IEA ubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110336 Ubr5-201 protein_coding Mus_musculus 0 11210

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