Transcript ID | Breast | Heart | Ovary |
---|---|---|---|
ENST00000522165 | 0.233±0.00 | 0.156±0.00 | 0.543±0.00 |
Genome
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Transcripts
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Transcript Info |
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Description: | collagen, type XIII, alpha 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000522165 ![]() |
COL13A1-014 |
ENSG00000197467 ![]() |
9606 | + |
10:69802424-69958701 |
protein_coding |
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0007TI | CIL_0007TI_0001 | VISTA | 10:69276019-69878973 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001763 | ISS | morphogenesis of a branching structure |
GO:0001958 | ISS | endochondral ossification |
GO:0005515 | IPI | protein binding |
GO:0005576 | TAS | extracellular region |
GO:0005600 | TAS | collagen type XIII trimer |
GO:0005788 | TAS | endoplasmic reticulum lumen |
GO:0005886 | TAS | plasma membrane |
GO:0007160 | IPI | cell-matrix adhesion |
GO:0008201 | IDA | heparin binding |
GO:0016337 | IEP | single organismal cell-cell adhesion |
GO:0022617 | TAS | extracellular matrix disassembly |
GO:0030154 | IEA | cell differentiation |
GO:0030198 | TAS | extracellular matrix organization |
GO:0030574 | TAS | collagen catabolic process |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000105453
![]() |
Col13a1-004 | protein_coding | Mus_musculus | 0 | 2207 |
ENSMUST00000051826
![]() |
Col13a1-002 | retained_intron | Mus_musculus | 0 | 1411 |
ENSMUST00000105452
![]() |
Col13a1-005 | protein_coding | Mus_musculus | 0 | 1282 |
ENSMUST00000105454
![]() |
Col13a1-001 | protein_coding | Mus_musculus | 0 | 1055 |
ENSMUST00000105451
![]() |
Col13a1-003 | processed_transcript | Mus_musculus | 0 | 765 |
ENSMUST00000145469
![]() |
Col13a1-006 | protein_coding | Mus_musculus | 0 | 411 |
ENSMUST00000153120
![]() |
Col13a1-007 | retained_intron | Mus_musculus | 0 | 219 |