C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitochondrial tRNA translation optimization 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522205 MTO1-011 ENSG00000135297 9606 + 6:73461778-73473532 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000522205
Transcript ID Muscle Ovary Placenta Testis
ENST00000522205 1.704±0.00 21.758±0.00 7.436±0.00 40.353±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0016491 IEA oxidoreductase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034896 Mto1-001 protein_coding Mus_musculus 0 556
ENSMUST00000148238 Mto1-007 nonsense_mediated_decay Mus_musculus 0 357
ENSMUST00000150850 Mto1-002 retained_intron Mus_musculus 0 265
ENSMUST00000165499 Gm17324-201 protein_coding Mus_musculus 2e-39 167

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