C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII), 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522397 TCEA1-006 ENSG00000187735 9606 - 8:53970264-54022448 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000522397
Transcript ID Ovary Testis
ENST00000522397 13.597±0.00 27.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0001 VISTA 8:53576629-54178623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117942 Tcea1-ps1-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000165720 Tcea1-002 protein_coding Mus_musculus 0 592
ENSMUST00000081551 Tcea1-001 protein_coding Mus_musculus 0 592
ENSMUST00000120989 Gm15223-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000155020 Lypla1-005 nonsense_mediated_decay Mus_musculus 0 241
ENSMUST00000117772 Gm12112-001 processed_pseudogene Mus_musculus 9e-23 111

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