C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transient receptor potential cation channel, subfamily A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523582 TRPA1-002 ENSG00000104321 9606 - 8:72019917-72065558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000523582
Transcript ID Liver
ENST00000523582 4.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FQ CIL_0003FQ_0001 CGP 8:71841549-72075617
CIL_0005BY CIL_0005BY_0002 CGP 8:72019917-72938349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041447 Trpa1-001 protein_coding Mus_musculus 0 2353

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