C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, nicotinic, alpha 2 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523695 CHRNA2-005 ENSG00000120903 9606 - 8:27461098-27479214 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0045211 IEA postsynaptic membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022620 Chrna2-001 protein_coding Mus_musculus 0 994
ENSMUST00000067120 Chrna4-001 protein_coding Mus_musculus 0 603
ENSMUST00000108851 Chrna4-002 protein_coding Mus_musculus 0 603
ENSDART00000079613 chrna2b-201 protein_coding Danio_rerio 0 472
ENSDART00000136317 chrna2b-001 protein_coding Danio_rerio 0 472
ENSDART00000033947 chrna2a-001 protein_coding Danio_rerio 0 436
ENSMUST00000033882 Chrna6-201 protein_coding Mus_musculus 0 254
ENSMUST00000029562 Chrnb2-201 protein_coding Mus_musculus 0 226

Loading