C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, nicotinic, alpha 2 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523695 CHRNA2-005 ENSG00000120903 9606 - 8:27461098-27479214 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0045211 IEA postsynaptic membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022620 Chrna2-001 protein_coding Mus_musculus 0 994
ENSMUST00000067120 Chrna4-001 protein_coding Mus_musculus 0 603
ENSMUST00000108851 Chrna4-002 protein_coding Mus_musculus 0 603
ENSDART00000079613 chrna2b-201 protein_coding Danio_rerio 0 472
ENSDART00000136317 chrna2b-001 protein_coding Danio_rerio 0 472
ENSDART00000033947 chrna2a-001 protein_coding Danio_rerio 0 436
ENSMUST00000033882 Chrna6-201 protein_coding Mus_musculus 0 254
ENSMUST00000029562 Chrnb2-201 protein_coding Mus_musculus 0 226

Loading