C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SRY (sex determining region Y)-box 5 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524155 SOX5P-001 ENSG00000254376 9606 - 8:87788562-87789688 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000524155
Transcript ID Brain
ENST00000524155 0.058±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170367 Sox5-201 protein_coding Mus_musculus 0 1061
ENSMUST00000111749 Sox5-005 protein_coding Mus_musculus 0 1061
ENSMUST00000077160 Sox5-002 protein_coding Mus_musculus 0 1061
ENSMUST00000111748 Sox5-003 protein_coding Mus_musculus 0 1061
ENSMUST00000038815 Sox5-001 protein_coding Mus_musculus 0 1059
ENSMUST00000111746 Sox5-004 processed_transcript Mus_musculus 0 628
ENSMUST00000124233 Sox5-010 protein_coding Mus_musculus 0 525
ENSMUST00000141102 Sox5-009 retained_intron Mus_musculus 0 436
ENSMUST00000144289 Sox5-013 protein_coding Mus_musculus 0 342

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