Transcript ID | Adrenal | Bladder | Brain | Colon | Heart | Kidney | Liver | Muscle | Placenta |
---|---|---|---|---|---|---|---|---|---|
ENSMUST00000111749 | 0.509±0.00 | 0.900±0.20 | 4.518±0.18 | 0.153±0.00 | 0.199±0.04 | 0.220±0.00 | 0.435±0.21 | 0.019±0.00 | 0.590±0.04 |
Transcript Info |
||||||
Description: | SRY (sex determining region Y)-box 5 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000111749 | Sox5-005 | ENSMUSG00000041540 | 10090 | - | 6:143828425-144209558 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0006Y0 | CIL_0006Y0_0003 | CGP | 6:143167230-144781977 |
CIL_0007NR | CIL_0007NR_0002 | UCNEbase | 6:143260703-144754208 |
CIL_0004XB | CIL_0004XB_0002 | CGP | 6:143828425-145076184 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000981 | IDA | sequence-specific DNA binding RNA polymerase II transcription factor activity |
GO:0001701 | IMP | in utero embryonic development |
GO:0003677 | IDA | DNA binding |
GO:0003700 | IDA | sequence-specific DNA binding transcription factor activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IDA | nucleus |
GO:0006366 | IDA | transcription from RNA polymerase II promoter |
GO:0021953 | IGI | central nervous system neuron differentiation |
GO:0044212 | IDA | transcription regulatory region DNA binding |
GO:0044798 | IDA | nuclear transcription factor complex |
GO:0045165 | IGI | cell fate commitment |
GO:0045892 | IDA | negative regulation of transcription, DNA-templated |
GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
GO:0046982 | IDA | protein heterodimerization activity |
GO:0048709 | IMP | oligodendrocyte differentiation |
GO:0051216 | IGI | cartilage development |
GO:0060164 | IMP | regulation of timing of neuron differentiation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000006737 | sox5-201 | protein_coding | Danio_rerio | 4e-34 | 152 |
ENSDART00000134595 | sox5-001 | protein_coding | Danio_rerio | 7e-32 | 145 |
ENST00000367206 | SOX5-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 953 |
ENST00000381381 | SOX5-201 | protein_coding | Homo_sapiens | 0 | 1511 |
ENST00000396007 | SOX5-001 | protein_coding | Homo_sapiens | 0 | 1659 |
ENST00000441133 | SOX5-004 | protein_coding | Homo_sapiens | 0 | 623 |
ENST00000451604 | SOX5-002 | protein_coding | Homo_sapiens | 0 | 1908 |
ENST00000524155 | SOX5P-001 | processed_pseudogene | Homo_sapiens | 0 | 1061 |
ENST00000535530 | SOX5-014 | processed_transcript | Homo_sapiens | 0 | 383 |
ENST00000536629 | SOX5-015 | processed_transcript | Homo_sapiens | 0 | 385 |
ENST00000536850 | SOX5-011 | processed_transcript | Homo_sapiens | 0.00001 | 55 |
ENST00000536911 | SOX5-013 | retained_intron | Homo_sapiens | 0 | 322 |
ENST00000537393 | SOX5-008 | protein_coding | Homo_sapiens | 0 | 1908 |
ENST00000538083 | SOX5-010 | protein_coding | Homo_sapiens | 0 | 259 |
ENST00000541536 | SOX5-009 | protein_coding | Homo_sapiens | 0 | 1493 |
ENST00000541847 | SOX5-016 | protein_coding | Homo_sapiens | 0 | 580 |
ENST00000542241 | SOX5-012 | processed_transcript | Homo_sapiens | 0 | 274 |
ENST00000545921 | SOX5-007 | protein_coding | Homo_sapiens | 0 | 1644 |
ENST00000546136 | SOX5-003 | protein_coding | Homo_sapiens | 0 | 1908 |