C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525748 SLC6A5-001 ENSG00000165970 9606 + 11:20599400-20659285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000525748
Transcript ID Ovary Testis
ENST00000525748 0.007±0.00 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AR CIL_0004AR_0002 CGP 11:20387530-20659285
CIL_00043M CIL_00043M_0001 CGP 11:20599400-21575681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0006836 IEA neurotransmitter transport
GO:0007268 TAS synaptic transmission
GO:0015375 IDA glycine:sodium symporter activity
GO:0016021 IEA integral component of membrane
GO:0036233 IDA glycine import
GO:0055085 TAS transmembrane transport
GO:0060012 IMP synaptic transmission, glycinergic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056442 Slc6a5-201 protein_coding Mus_musculus 0 3212
ENSMUST00000107605 Slc6a5-202 protein_coding Mus_musculus 0 2957

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