C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526248 RPS3-025 ENSG00000149273 9606 + 11:75399557-75405692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000526248
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000526248 257.440±0.00 637.044±0.00 30.494±22.92 250.979±0.00 289.962±0.00 118.725±0.00 134.991±0.00 103.142±0.00 560.457±0.00 206.339±0.00 938.395±0.00 336.541±0.00 165.247±53.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 518
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 420
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 420
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 231

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