C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526262 PPFIA1-004 ENSG00000131626 9606 + 11:70326344-70384403 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000526262
Transcript ID Liver
ENST00000526262 2.314±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182226 Ppfia1-002 protein_coding Mus_musculus 0 3391
ENSMUST00000168134 Ppfia1-003 protein_coding Mus_musculus 0 2776
ENSMUST00000182958 Ppfia1-004 nonsense_mediated_decay Mus_musculus 0 929
ENSMUST00000182982 Ppfia1-005 retained_intron Mus_musculus 0 806
ENSMUST00000183063 Ppfia1-010 processed_transcript Mus_musculus 0 403
ENSMUST00000183197 Ppfia1-009 retained_intron Mus_musculus 0 296

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