C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182982 Ppfia1-005 ENSMUSG00000037519 10090 - 7:144476759-144489337 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverMuscleENSMUST00000182982
Transcript ID Adrenal Heart Liver Muscle
ENSMUST00000182982 11.575±3.07 2.821±0.20 2.747±0.00 2.288±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253925 PPFIA1-001 protein_coding Homo_sapiens 0 811
ENST00000389547 PPFIA1-002 protein_coding Homo_sapiens 0 811
ENST00000525922 PPFIA1-025 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000526262 PPFIA1-004 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000528853 PPFIA1-023 protein_coding Homo_sapiens 0 429
ENST00000530548 PPFIA1-006 processed_transcript Homo_sapiens 0 806
ENST00000531657 PPFIA1-007 retained_intron Homo_sapiens 0 806
ENST00000532504 PPFIA1-003 nonsense_mediated_decay Homo_sapiens 0 811

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