C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526608 RPS3-021 ENSG00000149273 9606 + 11:75399537-75404868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000526608
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000526608 30.799±18.61 44.072±0.00 113.319±74.95 45.081±0.00 142.585±0.00 48.230±5.19 292.530±0.00 61.463±42.95 976.575±180.58 385.219±64.17 215.947±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 625
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 359
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 327
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 318

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