C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526783 PSMD13-011 ENSG00000185627 9606 + 11:244429-252827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyOvaryPlacentaTestisENST00000526783
Transcript ID Adipose Adrenal Brain Kidney Ovary Placenta Testis
ENST00000526783 28.236±0.00 51.802±0.00 26.880±0.00 17.221±0.00 63.008±0.00 54.194±0.00 29.652±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0001 CGP 11:207511-236931
CIL_0006QN CIL_0006QN_0001 CGP 11:215458-252984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166889 Psmd13-010 nonsense_mediated_decay Mus_musculus 0 745
ENSMUST00000151644 Psmd13-002 retained_intron Mus_musculus 0 745
ENSMUST00000026560 Psmd13-001 protein_coding Mus_musculus 0 745
ENSMUST00000163610 Psmd13-011 protein_coding Mus_musculus 0 741
ENSMUST00000130462 Psmd13-009 protein_coding Mus_musculus 0 427
ENSMUST00000164681 Psmd13-013 protein_coding Mus_musculus 0 427
ENSMUST00000129683 Psmd13-005 processed_transcript Mus_musculus 0 427
ENSMUST00000125668 Psmd13-008 retained_intron Mus_musculus 0 215
ENSMUST00000146875 Psmd13-006 retained_intron Mus_musculus 8.99634e-43 178
ENSMUST00000140411 Psmd13-003 processed_transcript Mus_musculus 8.99634e-43 178
ENSMUST00000124736 Psmd13-004 processed_transcript Mus_musculus 0.00000000000002 84

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