C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527547 CDC27-005 ENSG00000004897 9606 - 17:47120880-47189224 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungOvaryENST00000527547
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Ovary
ENST00000527547 0.473±0.00 3.159±0.00 2.221±0.00 1.867±0.00 1.117±0.00 1.941±0.00 2.321±0.00 2.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HD CIL_0008HD_0001 VISTA 17:46991162-47592148
CIL_0002QR CIL_0002QR_0001 CGP 17:47117703-47223679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093923 Cdc27-001 protein_coding Mus_musculus 0 3674
ENSMUST00000106962 Cdc27-002 protein_coding Mus_musculus 0 3517
ENSMUST00000106961 Cdc27-003 protein_coding Mus_musculus 0 1711
ENSMUST00000135303 Cdc27-004 processed_transcript Mus_musculus 0 520
ENSMUST00000127506 Cdc27-005 processed_transcript Mus_musculus 0 473

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