C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528439 RPS3-010 ENSG00000149273 9606 + 11:75399518-75405692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000528439
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000528439 23.771±0.00 70.953±0.00 72.098±0.00 16.683±0.00 36.724±0.00 49.944±0.00 64.980±0.00 750.015±0.00 295.836±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 357
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 357
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 355
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 261

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