C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Putative short transient receptor potential channel 2-like protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528511 RP11-849H4.2-003 ENSG00000254469 9606 - 11:71884313-71928595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyPlacentaTestisENST00000528511
Transcript ID Adipose Kidney Placenta Testis
ENST00000528511 0.148±0.00 0.160±0.00 0.221±0.15 0.422±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000012 IEA single strand break repair
GO:0000139 IEA Golgi membrane
GO:0002121 IEA inter-male aggressive behavior
GO:0002124 IEA territorial aggressive behavior
GO:0003684 IEA damaged DNA binding
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IBA:IEA nucleus
GO:0005635 IEA nuclear envelope
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0006284 IBA base-excision repair
GO:0006816 IEA calcium ion transport
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007340 IEA acrosome reaction
GO:0008050 IEA female courtship behavior
GO:0010468 IEA regulation of gene expression
GO:0012505 IEA endomembrane system
GO:0015279 IEA store-operated calcium channel activity
GO:0019236 IEA response to pheromone
GO:0019992 IEA diacylglycerol binding
GO:0032590 IEA dendrite membrane
GO:0048047 IEA mating behavior, sex discrimination
GO:0070588 IEA calcium ion transmembrane transport
GO:1902436 IEA negative regulation of male mating behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094130 Xndc1-002 protein_coding Mus_musculus 0 510
ENSMUST00000153176 Xndc1-004 retained_intron Mus_musculus 0 510
ENSMUST00000106950 Xndc1-001 protein_coding Mus_musculus 0 510
ENSMUST00000094129 Trpc2-201 protein_coding Mus_musculus 0 510
ENSMUST00000084843 Trpc2-001 protein_coding Mus_musculus 0 510
ENSMUST00000123372 Trpc2-002 nonsense_mediated_decay Mus_musculus 0 510
ENSMUST00000146450 Xndc1-007 protein_coding Mus_musculus 0 484

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