| Transcript ID | Muscle | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENST00000528916 | 1.118±0.00 | 7.183±0.00 | 10.082±0.00 | 1.753±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | parvin, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000528916  |
PARVA-004 |
ENSG00000197702 |
9606 | + |
11:12452735-12511533  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008T3 | CIL_0008T3_0001 | VISTA | 11:11882278-12483702 |
| CIL_0008YS | CIL_0008YS_0001 | VISTA | 11:11899653-12500760 |
| CIL_0007SQ | CIL_0007SQ_0001 | VISTA | 11:11959946-12561868 |
| CIL_0003PF | CIL_0003PF_0001 | CGP | 11:12276080-12530801 |
| CIL_0003PG | CIL_0003PG_0001 | CGP | 11:12377185-12944483 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005515 | IEA | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005925 | IDA | focal adhesion |
| GO:0007155 | IEA | cell adhesion |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0031532 | IEA | actin cytoskeleton reorganization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000106640
|
Parva-004 | protein_coding | Mus_musculus | 0 | 811 |
|
ENSMUST00000033030
|
Parva-001 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000106643
|
Parva-002 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSDART00000011351
|
parvab-001 | protein_coding | Danio_rerio | 0 | 492 |
|
ENSDART00000056847
|
parvab-201 | protein_coding | Danio_rerio | 0 | 492 |
|
ENSMUST00000126047
|
Parva-006 | processed_transcript | Mus_musculus | 3e-28 | 130 |
