C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529679 PSMD13-013 ENSG00000185627 9606 + 11:251543-252617 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000529679
Transcript ID Colon
ENST00000529679 6.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0001 CGP 11:207511-236931
CIL_0006QN CIL_0006QN_0001 CGP 11:215458-252984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026560 Psmd13-001 protein_coding Mus_musculus 0 287
ENSMUST00000166889 Psmd13-010 nonsense_mediated_decay Mus_musculus 0 281
ENSMUST00000163610 Psmd13-011 protein_coding Mus_musculus 0 281
ENSMUST00000130462 Psmd13-009 protein_coding Mus_musculus 2e-32 143
ENSMUST00000125668 Psmd13-008 retained_intron Mus_musculus 2e-26 122
ENSMUST00000151644 Psmd13-002 retained_intron Mus_musculus 2e-26 122
ENSMUST00000165539 Psmd13-012 protein_coding Mus_musculus 3e-25 119

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