C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149444 Polg-002 ENSMUSG00000039176 10090 - 7:79449563-79466180 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149444
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149444 5.139±1.82 2.951±0.55 5.859±4.24 5.764±1.17 4.463±0.37 3.560±0.52 3.273±0.71 3.618±0.00 2.940±0.52 7.702±3.47 19.872±10.18 12.311±5.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011C CIL_00011C_0002 CGP 7:79374871-79450265
CIL_0002RC CIL_0002RC_0003 CGP 7:79391929-79466362
CIL_0002R9 CIL_0002R9_0003 CGP 7:79448791-79617657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 ISO DNA-directed DNA polymerase activity
GO:0004527 IDA exonuclease activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005760 IEA gamma DNA polymerase complex
GO:0006264 IMP mitochondrial DNA replication
GO:0007568 IMP aging
GO:0071897 ISO DNA biosynthetic process
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268124 POLG-001 protein_coding Homo_sapiens 0 2580
ENST00000300027 FANCI-001 protein_coding Homo_sapiens 0 302
ENST00000310775 FANCI-002 protein_coding Homo_sapiens 0 302
ENST00000442287 POLG-002 protein_coding Homo_sapiens 0 2580
ENST00000525806 POLG-011 processed_transcript Homo_sapiens 0 261
ENST00000526314 POLG-013 protein_coding Homo_sapiens 0 211
ENST00000526398 POLG-005 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000526671 POLG-010 retained_intron Homo_sapiens 0 499
ENST00000528881 POLG-012 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000530292 POLG-009 nonsense_mediated_decay Homo_sapiens 0 636
ENST00000530715 POLG-008 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000532363 POLG-003 retained_intron Homo_sapiens 0 409
ENST00000566895 FANCI-006 retained_intron Homo_sapiens 0 302

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