C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530721 RPS3-012 ENSG00000149273 9606 + 11:75399519-75405692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000530721
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000530721 470.974±0.00 892.790±0.00 46.927±38.11 417.074±0.00 627.929±0.00 156.873±0.00 60.877±0.00 434.071±0.00 289.844±83.65 408.349±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 754
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 460
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 429
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 274

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