C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAD51 recombinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531277 RAD51-010 ENSG00000051180 9606 + 15:40698757-40729634 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000531277
Transcript ID Muscle
ENST00000531277 0.962±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IO CIL_0005IO_0002 CGP 15:40694774-40755851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006281 IEA DNA repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028795 Rad51-001 protein_coding Mus_musculus 0 593
ENSMUST00000151406 Rad51-008 protein_coding Mus_musculus 0 556
ENSMUST00000110828 Rad51-004 retained_intron Mus_musculus 0 435
ENSMUST00000152327 Rad51-003 nonsense_mediated_decay Mus_musculus 0 425
ENSMUST00000140939 Rad51-005 protein_coding Mus_musculus 0 316
ENSMUST00000154683 Rad51-007 retained_intron Mus_musculus 0 315
ENSMUST00000141389 Rad51-006 retained_intron Mus_musculus 0.00000000000001 84

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