C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005IO_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000041411-ENSDARG00000041407 | CGP | 7955 | 20:46678960-46718277  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000041402  (zc3h14)zinc finger CCCH-type containing 14 |
ENSDART00000060695 (zc3h14-001)
|
46743172-46774074 | protein_coding | |
|
ENSDART00000152868 (zc3h14-005)
|
46759542-46764855 | processed_transcript | ||
|
ENSDART00000152977 (zc3h14-004)
|
46764648-46774025 | protein_coding | ||
|
ENSDART00000153024 (zc3h14-003)
|
46708041-46745687 | processed_transcript | ||
|
ENSDART00000153346 (zc3h14-002)
|
46693577-46745781 | processed_transcript | ||
|
ENSDART00000153447 (zc3h14-006)
|
46759590-46768196 | retained_intron | ||
|
ENSDARG00000041407 (rmdn3) regulator of microtubule dynamics 3 |
ENSDART00000060702 (rmdn3-001)
|
46693279-46718277 | protein_coding | |
|
ENSDART00000153324 (rmdn3-002)
|
46701475-46708253 | nonsense_mediated_decay | ||
|
ENSDARG00000041411 (rad51) RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) |
ENSDART00000060706 (rad51-001)
|
46678981-46693134 | protein_coding | |
|
ENSDART00000113264 (rad51-003)
|
46685301-46692676 | protein_coding | ||
|
ENSDART00000143858 (rad51-002)
|
46679062-46681793 | protein_coding | ||
|
ENSDART00000153290 (rad51-004)
|
46678960-46681957 | retained_intron | ||
| CIL_0005IO_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000051180-ENSG00000137824 | CGP | 9606 | 15:40694774-40755851 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000051180 (RAD51) RAD51 recombinase |
ENST00000267868 (RAD51-001)
|
40695160-40732339 | protein_coding | |
|
ENST00000382643 (RAD51-009)
|
40695174-40731593 | protein_coding | ||
|
ENST00000423169 (RAD51-002)
|
40695129-40731592 | protein_coding | ||
|
ENST00000525066 (RAD51-004)
|
40695187-40731557 | nonsense_mediated_decay | ||
|
ENST00000526763 (RAD51-006)
|
40695463-40701201 | protein_coding | ||
|
ENST00000527860 (RAD51-007)
|
40694774-40718886 | protein_coding | ||
|
ENST00000531277 (RAD51-010)
|
40698757-40729634 | nonsense_mediated_decay | ||
|
ENST00000532743 (RAD51-008)
|
40695174-40731416 | protein_coding | ||
|
ENST00000533741 (RAD51-013)
|
40701131-40718827 | nonsense_mediated_decay | ||
|
ENST00000557850 (RAD51-003)
|
40695172-40731590 | protein_coding | ||
|
ENSG00000137824 (RMDN3) regulator of microtubule dynamics 3 |
ENST00000260385 (RMDN3-001)
|
40735884-40755851 | protein_coding | |
|
ENST00000338376 (RMDN3-003)
|
40735888-40755260 | protein_coding | ||
|
ENST00000557831 (RMDN3-006)
|
40736338-40737820 | retained_intron | ||
|
ENST00000558232 (RMDN3-012)
|
40736427-40745211 | protein_coding | ||
|
ENST00000558364 (RMDN3-009)
|
40740150-40747782 | processed_transcript | ||
|
ENST00000558560 (RMDN3-010)
|
40737678-40752178 | processed_transcript | ||
|
ENST00000558777 (RMDN3-004)
|
40735888-40755246 | nonsense_mediated_decay | ||
|
ENST00000560460 (RMDN3-008)
|
40738510-40755253 | protein_coding | ||
|
ENST00000560588 (RMDN3-005)
|
40735885-40739680 | retained_intron | ||
|
ENST00000560779 (RMDN3-011)
|
40737629-40744305 | retained_intron | ||
|
ENST00000560905 (RMDN3-007)
|
40744094-40755336 | protein_coding | ||
|
ENSG00000245849 (RAD51-AS1) RAD51 antisense RNA 1 (head to head) |
ENST00000499988 (RAD51-AS1-001)
|
40693741-40695107 | retained_intron | |
|
ENST00000526635 (RAD51-AS1-003)
|
40687723-40695098 | antisense | ||
|
ENST00000533146 (RAD51-AS1-004)
|
40686724-40695096 | antisense | ||
| CIL_0005IO_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000027323-ENSMUSG00000070730 | CGP | 10090 | 2:119112793-119157034 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027323 (Rad51) RAD51 homolog |
ENSMUST00000028795 (Rad51-001)
|
119112807-119137290 | protein_coding | |
|
ENSMUST00000110828 (Rad51-004)
|
119112814-119133599 | retained_intron | ||
|
ENSMUST00000140939 (Rad51-005)
|
119112793-119123846 | protein_coding | ||
|
ENSMUST00000141389 (Rad51-006)
|
119118696-119122262 | retained_intron | ||
|
ENSMUST00000143934 (Rad51-002)
|
119134162-119135208 | retained_intron | ||
|
ENSMUST00000151406 (Rad51-008)
|
119123803-119147445 | protein_coding | ||
|
ENSMUST00000152327 (Rad51-003)
|
119112817-119137037 | nonsense_mediated_decay | ||
|
ENSMUST00000154683 (Rad51-007)
|
119131518-119134455 | retained_intron | ||
|
ENSMUSG00000070730 (Rmdn3) regulator of microtubule dynamics 3 |
ENSMUST00000094695 (Rmdn3-001)
|
119137001-119157034 | protein_coding | |
|
ENSMUST00000127965 (Rmdn3-007)
|
119139056-119140875 | retained_intron | ||
|
ENSMUST00000129351 (Rmdn3-003)
|
119154054-119156948 | protein_coding | ||
|
ENSMUST00000130249 (Rmdn3-005)
|
119146155-119147445 | retained_intron | ||
|
ENSMUST00000135419 (Rmdn3-004)
|
119154024-119156824 | protein_coding | ||
|
ENSMUST00000139519 (Rmdn3-002)
|
119154064-119156964 | protein_coding | ||
|
ENSMUST00000156332 (Rmdn3-006)
|
119142418-119147436 | retained_intron | ||
Expression Patterns
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