C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532872 RPS3-015 ENSG00000149273 9606 + 11:75399530-75405692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000532872
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000532872 21.833±0.00 51.422±0.00 69.672±0.00 11.674±0.00 52.532±0.00 73.662±0.00 68.452±0.00 23.111±0.00 101.505±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 566
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 333
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 333
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 261

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