C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533064 TRIM3-011 ENSG00000110171 9606 - 11:6448613-6450391 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000533064
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000533064 0.652±0.00 2.328±0.00 2.595±0.00 1.255±0.00 0.138±0.00 1.464±0.00 2.479±0.00 0.373±0.00 3.152±0.78 0.720±0.39 0.625±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A5 CIL_0004A5_0001 CGP 11:6431049-6474459
CIL_0004A8 CIL_0004A8_0001 CGP 11:6448613-6481479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106789 Trim3-001 protein_coding Mus_musculus 0 894
ENSMUST00000057525 Trim3-003 protein_coding Mus_musculus 0 894
ENSMUST00000156581 Trim3-009 retained_intron Mus_musculus 0 377

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