C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004A5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110169-ENSG00000110171 CGP 9606 11:6431049-6474459
GeneTranscriptPositionBiotype
ENSG00000110169 (HPX)
hemopexin 		ENST00000265983 (HPX-001) 6431049-6441064 protein_coding
ENST00000525057 (HPX-002) 6437625-6442617 processed_transcript
ENST00000527105 (HPX-012) 6440486-6440739 processed_transcript
ENST00000527556 (HPX-007) 6431302-6437708 retained_intron
ENST00000528348 (HPX-003) 6439609-6440990 retained_intron
ENST00000529037 (HPX-009) 6431395-6432319 processed_transcript
ENST00000529775 (HPX-008) 6437045-6438109 retained_intron
ENST00000533369 (HPX-006) 6438334-6440987 retained_intron
ENST00000533561 (HPX-004) 6431906-6441066 processed_transcript
ENST00000533856 (HPX-005) 6438479-6440972 retained_intron
ENST00000534429 (HPX-010) 6431950-6437667 processed_transcript
ENST00000534800 (HPX-011) 6440165-6440975 processed_transcript
ENST00000615166 (HPX-201) 6437097-6441024 protein_coding
ENSG00000110171 (TRIM3)
tripartite motif containing 3 		ENST00000345851 (TRIM3-001) 6448615-6473984 protein_coding
ENST00000359518 (TRIM3-201) 6448617-6473984 protein_coding
ENST00000525074 (TRIM3-002) 6448614-6474459 protein_coding
ENST00000526845 (TRIM3-010) 6451538-6456144 processed_transcript
ENST00000527237 (TRIM3-013) 6456152-6456611 processed_transcript
ENST00000528227 (TRIM3-006) 6456944-6473923 protein_coding
ENST00000528932 (TRIM3-007) 6457404-6473893 processed_transcript
ENST00000529058 (TRIM3-009) 6456126-6457733 processed_transcript
ENST00000529529 (TRIM3-005) 6458138-6474394 protein_coding
ENST00000530724 (TRIM3-012) 6450169-6451299 processed_transcript
ENST00000532542 (TRIM3-003) 6448617-6453245 retained_intron
ENST00000533064 (TRIM3-011) 6448613-6450391 retained_intron
ENST00000533309 (TRIM3-004) 6448614-6451969 retained_intron
ENST00000536344 (TRIM3-202) 6448617-6473984 protein_coding
CIL_0004A5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030895-ENSMUSG00000036989 CGP 10090 7:105591613-105633571
GeneTranscriptPositionBiotype
ENSMUSG00000030895 (Hpx)
hemopexin 		ENSMUST00000033185 (Hpx-201) 105591613-105600116 protein_coding
ENSMUSG00000036989 (Trim3)
tripartite motif-containing 3 		ENSMUST00000057525 (Trim3-003) 105610470-105633560 protein_coding
ENSMUST00000106789 (Trim3-001) 105610648-105633537 protein_coding
ENSMUST00000106791 (Trim3-002) 105604463-105633508 protein_coding
ENSMUST00000140882 (Trim3-004) 105619106-105633571 processed_transcript
ENSMUST00000147044 (Trim3-005) 105619383-105633485 protein_coding
ENSMUST00000150363 (Trim3-007) 105617031-105618026 retained_intron
ENSMUST00000153371 (Trim3-006) 105618784-105633525 protein_coding
ENSMUST00000154218 (Trim3-008) 105612308-105613406 retained_intron
ENSMUST00000156581 (Trim3-009) 105611139-105611856 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A5_0001ENSG00000110169ENST00000265983ENST00000525057ENST00000527105ENST00000527556ENST00000528348ENST00000529037ENST00000529775ENST00000533369ENST00000533561ENST00000533856ENST00000534429ENST00000534800ENST00000615166ENSG00000110171ENST00000345851ENST00000359518ENST00000525074ENST00000526845ENST00000527237ENST00000528227ENST00000528932ENST00000529058ENST00000529529ENST00000530724ENST00000532542ENST00000533064ENST00000533309ENST00000536344CIL_0004A5_0002ENSMUSG00000030895ENSMUST00000033185ENSMUSG00000036989ENSMUST00000057525ENSMUST00000106789ENSMUST00000106791ENSMUST00000140882ENSMUST00000147044ENSMUST00000150363ENSMUST00000153371ENSMUST00000154218ENSMUST00000156581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004A5_0001ENSG00000110169ENST00000265983ENST00000525057ENST00000527105ENST00000527556ENST00000528348ENST00000529037ENST00000529775ENST00000533369ENST00000533561ENST00000533856ENST00000534429ENST00000534800ENST00000615166ENSG00000110171ENST00000345851ENST00000359518ENST00000525074ENST00000526845ENST00000527237ENST00000529058ENST00000529529ENST00000530724ENST00000532542ENST00000533064ENST00000533309ENST00000536344CIL_0004A5_0002ENSMUSG00000030895ENSMUST00000033185ENSMUSG00000036989ENSMUST00000057525ENSMUST00000106789ENSMUST00000140882ENSMUST00000153371ENSMUST00000154218
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110169 ENST00000265983 N/A 0.111±0.00 0.056±0.00 0.086±0.00 1.427±0.00 N/A N/A 222.828±222.80 2132.790±0.00 0.083±0.00 N/A 0.349±0.00 0.206±0.08 N/A
ENST00000525057 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A 0.229±0.00
ENST00000527105 N/A N/A N/A N/A N/A N/A 0.671±0.00 0.608±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527556 N/A N/A N/A 0.107±0.00 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00
ENST00000528348 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A 0.234±0.00
ENST00000529037 N/A N/A N/A 0.093±0.00 N/A 1.385±0.00 0.030±0.00 N/A N/A 0.122±0.00 N/A N/A N/A N/A
ENST00000529775 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A 0.120±0.00 0.368±0.00
ENST00000533369 N/A N/A 0.088±0.00 0.151±0.00 1.208±0.00 N/A N/A 528.067±0.00 0.169±0.00 N/A 0.381±0.00 N/A N/A N/A
ENST00000533561 N/A N/A 0.160±0.00 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533856 N/A N/A N/A N/A N/A N/A N/A N/A 0.631±0.00 N/A N/A N/A N/A N/A
ENST00000534429 0.147±0.00 N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A
ENST00000534800 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615166 N/A N/A N/A N/A 0.374±0.00 N/A 0.024±0.00 0.169±0.00 N/A N/A N/A 0.051±0.00 0.141±0.00 N/A
ENSG00000110171 ENST00000345851 2.205±0.00 3.045±0.00 N/A 3.893±2.39 1.816±0.89 4.244±0.00 1.495±1.43 3.471±0.00 0.780±0.39 2.562±1.99 N/A 5.059±1.57 3.097±1.04 3.628±0.00
ENST00000359518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A N/A
ENST00000525074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.633±0.00
ENST00000526845 N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A 1.831±0.00 N/A N/A
ENST00000527237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.944±0.00 N/A N/A
ENST00000528227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529058 N/A N/A N/A N/A N/A N/A N/A N/A 0.823±0.00 N/A N/A N/A N/A N/A
ENST00000529529 N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000530724 N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A 0.831±0.00 N/A N/A N/A N/A N/A
ENST00000532542 N/A 0.361±0.00 N/A 0.465±0.00 N/A N/A N/A N/A 0.115±0.00 N/A N/A 0.560±0.00 N/A N/A
ENST00000533064 0.652±0.00 2.328±0.00 N/A 2.595±0.00 N/A 1.255±0.00 0.138±0.00 1.464±0.00 N/A 2.479±0.00 0.373±0.00 3.152±0.78 0.720±0.39 0.625±0.00
ENST00000533309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.757±0.00 N/A
ENST00000536344 0.985±0.00 N/A N/A 1.761±0.00 N/A 0.689±0.00 N/A 1.293±0.00 0.532±0.00 N/A 1.424±1.23 2.506±0.00 0.780±0.00 1.182±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030895 ENSMUST00000033185 0.814±0.16 0.855±0.68 0.844±0.17 0.160±0.01 4.343±3.90 0.174±0.07 0.370±0.23 0.250±0.12 1570.637±1247.52 1.691±0.25 0.071±0.05 1.986±1.27 7.745±10.24 0.181±0.04
ENSMUSG00000036989 ENSMUST00000057525 6.222±1.98 5.878±1.13 3.323±0.00 3.492±0.54 5.288±0.80 3.507±1.72 3.309±0.84 6.041±0.77 1.037±0.41 17.674±2.13 N/A 6.078±1.55 0.990±0.13 0.785±0.08
ENSMUST00000106789 12.748±1.78 5.303±1.50 11.928±0.72 26.059±8.81 8.057±2.71 6.546±0.94 6.660±0.40 7.489±1.31 1.929±0.72 29.374±3.30 4.669±0.68 9.757±2.47 5.424±1.76 0.589±0.26
ENSMUST00000106791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140882 14.659±0.00 12.200±1.45 N/A N/A 10.613±0.65 9.777±1.42 N/A 10.524±0.00 N/A 36.601±0.00 N/A 12.630±1.59 N/A N/A
ENSMUST00000147044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153371 N/A 6.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154218 N/A N/A N/A 29.289±0.00 N/A N/A N/A N/A N/A N/A N/A 6.301±0.00 5.777±3.22 N/A
ENSMUST00000156581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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