C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, R type, alpha 1E subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533229 CACNA1E-005 ENSG00000198216 9606 + 1:181483311-181652094 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000533229
Transcript ID Lung
ENST00000533229 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W1 CIL_0007W1_0001 VISTA 1:180851913-181454518

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187541 Cacna1e-001 protein_coding Mus_musculus 0 1816
ENSMUST00000004214 Cacna1e-201 protein_coding Mus_musculus 0 1622
ENSMUST00000188965 Cacna1e-002 retained_intron Mus_musculus 0 1622
ENSMUST00000188321 Cacna1e-003 retained_intron Mus_musculus 0 804
ENSMUST00000135382 Cacna1a-003 retained_intron Mus_musculus 0 359
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 359
ENSMUST00000100348 Cacna1b-201 protein_coding Mus_musculus 5e-34 150
ENSMUST00000114447 Cacna1b-003 protein_coding Mus_musculus 5e-34 150
ENSMUST00000041342 Cacna1b-002 protein_coding Mus_musculus 5e-34 150
ENSMUST00000102939 Cacna1b-004 protein_coding Mus_musculus 5e-34 150
ENSMUST00000070864 Cacna1b-001 protein_coding Mus_musculus 5e-34 150

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