C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TSEN15 tRNA splicing endonuclease subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533373 TSEN15-007 ENSG00000198860 9606 + 1:184051726-184073023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENST00000533373
Transcript ID Heart Kidney Liver
ENST00000533373 2.878±0.00 3.638±0.00 2.637±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BM CIL_0001BM_0002 CGP 1:184051677-184629020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000213 IEA tRNA-intron endonuclease activity
GO:0006388 IEA tRNA splicing, via endonucleolytic cleavage and ligation
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015124 Tsen15-001 protein_coding Mus_musculus 0 407
ENSMUST00000096101 Gm5874-201 processed_pseudogene Mus_musculus 0 392
ENSMUST00000162371 Tsen15-002 protein_coding Mus_musculus 0 355
ENSMUST00000159717 Tsen15-004 retained_intron Mus_musculus 0 339

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