C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: midkine (neurite growth-promoting factor 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533952 MDK-011 ENSG00000110492 9606 + 11:46381207-46382736 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyOvaryPlacentaENST00000533952
Transcript ID Breast Kidney Ovary Placenta
ENST00000533952 3.636±0.00 0.880±0.00 22.790±0.00 23.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002US CIL_0002US_0003 CGP 11:46332905-46383837
CIL_0002LJ CIL_0002LJ_0002 CGP 11:46380756-46386608

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008083 IEA growth factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111309 Mdk-004 protein_coding Mus_musculus 0 455
ENSMUST00000028672 Mdk-001 protein_coding Mus_musculus 0 455
ENSMUST00000090602 Mdk-003 protein_coding Mus_musculus 0 451
ENSMUST00000069423 Mdk-002 protein_coding Mus_musculus 0 451

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