C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PTPRF interacting protein, binding protein 1 (liprin beta 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535047 PPFIBP1-006 ENSG00000110841 9606 + 12:27524220-27647977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryENST00000535047
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary
ENST00000535047 12.153±0.00 7.052±0.00 9.798±0.00 8.021±0.00 29.027±0.00 12.069±0.00 13.906±0.00 17.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056H CIL_00056H_0001 CGP 12:27466810-27695564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 NAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 TAS cell adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111623 Ppfibp1-002 protein_coding Mus_musculus 0 676
ENSMUST00000016631 Ppfibp1-001 protein_coding Mus_musculus 0 676

Loading