| Transcript ID | Brain | Liver | Muscle | Placenta |
|---|---|---|---|---|
| ENST00000536777 | 0.981±0.00 | 0.175±0.00 | 0.875±0.24 | 0.288±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | lysine (K)-specific demethylase 6A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000536777  |
KDM6A-202 |
ENSG00000147050 |
9606 | + |
X:44873177-45112598  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005QA | CIL_0005QA_0001 | CGP | X:44844004-45112602 |
| CIL_0003JA | CIL_0003JA_0002 | CGP | X:44873177-45200901 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0046872 | IEA | metal ion binding |
| GO:0071557 | IEA | histone H3-K27 demethylation |
| GO:0071558 | IEA | histone demethylase activity (H3-K27 specific) |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000044484
|
Kdm6a-001 | protein_coding | Mus_musculus | 0 | 6152 |
|
ENSMUST00000052368
|
Kdm6a-002 | protein_coding | Mus_musculus | 0 | 6074 |
|
ENSMUST00000130978
|
Kdm6a-003 | retained_intron | Mus_musculus | 0 | 2370 |
|
ENSMUST00000154004
|
Uty-005 | protein_coding | Mus_musculus | 0 | 2006 |
|
ENSMUST00000139365
|
Uty-004 | protein_coding | Mus_musculus | 0 | 2006 |
|
ENSMUST00000069309
|
Uty-001 | protein_coding | Mus_musculus | 0 | 2006 |
|
ENSMUST00000154666
|
Uty-007 | nonsense_mediated_decay | Mus_musculus | 0 | 2006 |
|
ENSMUST00000143286
|
Uty-008 | protein_coding | Mus_musculus | 0 | 2006 |
|
ENSMUST00000137048
|
Uty-006 | protein_coding | Mus_musculus | 0 | 1181 |
|
ENSMUST00000143958
|
Uty-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1035 |
|
ENSDART00000088469
|
kdm6a-201 | protein_coding | Danio_rerio | 0 | 948 |
|
ENSDART00000144623
|
kdm6a-001 | protein_coding | Danio_rerio | 0 | 948 |
|
ENSMUST00000155161
|
Kdm6a-004 | retained_intron | Mus_musculus | 0 | 468 |
|
ENSMUST00000154527
|
Uty-010 | retained_intron | Mus_musculus | 0 | 298 |
|
ENSMUST00000150715
|
Uty-011 | nonsense_mediated_decay | Mus_musculus | 0 | 294 |
|
ENSMUST00000157073
|
Uty-003 | processed_transcript | Mus_musculus | 0 | 278 |
|
ENSMUST00000185837
|
Uty-012 | retained_intron | Mus_musculus | 1e-39 | 169 |
