C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 88
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537103 IFT88-004 ENSG00000032742 9606 + 13:20597014-20642896 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENST00000537103
Transcript ID Liver Placenta
ENST00000537103 0.686±0.00 0.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SM CIL_0003SM_0001 CGP 13:20403667-20691437
CIL_0003SN CIL_0003SN_0001 CGP 13:20567069-20723098

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154492 Ift88-002 retained_intron Mus_musculus 0 861
ENSMUST00000122063 Ift88-001 protein_coding Mus_musculus 0 795
ENSMUST00000171682 Ift88-005 nonsense_mediated_decay Mus_musculus 0 291

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