C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 88
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154492 Ift88-002 ENSMUSG00000040040 10090 + 14:57424106-57517936 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverOvaryPlacentaENSMUST00000154492
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Ovary Placenta
ENSMUST00000154492 0.357±0.21 0.329±0.01 0.751±0.06 0.978±0.43 0.264±0.01 0.312±0.02 0.197±0.03 0.807±0.11 0.418±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SM CIL_0003SM_0002 CGP 14:57275034-57517936
CIL_0003SN CIL_0003SN_0002 CGP 14:57424062-57543165

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319980 IFT88-002 protein_coding Homo_sapiens 0 1670
ENST00000351808 IFT88-001 protein_coding Homo_sapiens 0 1670
ENST00000537103 IFT88-004 protein_coding Homo_sapiens 0 861

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