C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec23 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537403 SEC23A-002 ENSG00000100934 9606 - 14:39031919-39088723 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VV CIL_0003VV_0001 CGP 14:38254103-39109646
CIL_0003VW CIL_0003VW_0001 CGP 14:39031919-39136973

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0005515 IPI protein binding
GO:0005783 TAS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 TAS:IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016192 TAS vesicle-mediated transport
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 IEA COPII vesicle coat
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021375 Sec23a-001 protein_coding Mus_musculus 0 2410
ENSMUST00000165134 Sec23a-004 protein_coding Mus_musculus 0 2388
ENSMUST00000154399 Sec23a-003 retained_intron Mus_musculus 0 374
ENSMUST00000169976 Sec23a-005 retained_intron Mus_musculus 2e-36 159

Loading