C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538272 SLC6A12-009 ENSG00000111181 9606 - 12:197911-203507 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENST00000538272
Transcript ID Heart Ovary
ENST00000538272 0.324±0.00 0.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Y CIL_00083Y_0001 VISTA 12:106900-709490

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171008 Slc6a12-007 protein_coding Mus_musculus 0 479
ENSMUST00000032200 Slc6a12-002 protein_coding Mus_musculus 0 479
ENSMUST00000166457 Slc6a12-001 protein_coding Mus_musculus 0 479
ENSMUST00000171874 Slc6a12-004 retained_intron Mus_musculus 0 309
ENSMUST00000163771 Slc6a12-009 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000142021 Slc6a13-003 processed_transcript Mus_musculus 0 289
ENSMUST00000064580 Slc6a13-001 protein_coding Mus_musculus 0 289
ENSMUST00000166390 Slc6a12-010 nonsense_mediated_decay Mus_musculus 7.00649e-43 178

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